BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034C03LP1|AL429870
(869 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1486 1673 0.0
>3x_Contig1486
Length = 12131
Score = 1673 bits (844), Expect = 0.0
Identities = 866/871 (99%), Gaps = 2/871 (0%)
Strand = Plus / Minus
Query: 1 gatcttaacgttaacctctagttcatcatcgaagataanaccagggacaaatccaactgc 60
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 9549 gatcttaacgttaacctctagttcatcatcgaagatgaaaccagggacaaatccaactgc 9490
Query: 61 tctttttttgcggataatttgacatttcgatggtaatgcaagcagatgacttaattcgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9489 tctttttttgcggataatttgacatttcgatggtaatgcaagcagatgacttaattcgcc 9430
Query: 121 aaaacacgtctgtgcgacgtctaaggtagcgtcgatatcatcatcagaccaagctttaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9429 aaaacacgtctgtgcgacgtctaaggtagcgtcgatatcatcatcagaccaagctttaac 9370
Query: 181 acttgagggcacccattcatcgtcatcaatggacttaaaaccaaattgttccgaggtctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9369 acttgagggcacccattcatcgtcatcaatggacttaaaaccaaattgttccgaggtctc 9310
Query: 241 gaaatactggaacaaatagttagattcacctcccataacggtcaattttgatttctgttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9309 gaaatactggaacaaatagttagattcacctcccataacggtcaattttgatttctgttc 9250
Query: 301 caacgacattgacttatcggagaacaacgcaaagcatagtccatacagacgttccttgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9249 caacgacattgacttatcggagaacaacgcaaagcatagtccatacagacgttccttgta 9190
Query: 361 tttatctgggtcatcatacccggcggcagtaacaacaccaacgttgatcccacgtttcaa 420
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 9189 tttatctgggtcatcatacccggcggcagtgacaacaccaacgttgatcccacgtttcaa 9130
Query: 421 caacgtgataatccttgtaacgattttaccacctctttcaatggatcccccatcctcata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9129 caacgtgataatccttgtaacgattttaccacctctttcaatggatcccccatcctcata 9070
Query: 481 tagcgtaacgtcaccatcaaaagtgaccaatttcaattctttcgatttgagtaaggccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9069 tagcgtaacgtcaccatcaaaagtgaccaatttcaattctttcgatttgagtaaggccaa 9010
Query: 541 aatctgggcagagtttaaaatgtgtctgatatcattaaaggacggagaaaccatttttct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9009 aatctgggcagagtttaaaatgtgtctgatatcattaaaggacggagaaaccatttttct 8950
Query: 601 gctacatatagcacgtcttctgttttgaacttcgaaagcttccaccaagggtaaatgggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8949 gctacatatagcacgtcttctgttttgaacttcgaaagcttccaccaagggtaaatgggt 8890
Query: 661 gaaaaacgttccaacttgtggaactagttgatctagccttgcttcttctagagatcccaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8889 gaaaaacgttccaacttgtggaactagttgatctagccttgcttcttctagagatcccaa 8830
Query: 721 ctgcctacgcctgttctggatttcaatcttttgggaaa-caaattttcaatatcgctgaa 779
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 8829 ctgcctacgcctgttctggatttcaatcttttgggaaaccaaattttcaatatcgctgaa 8770
Query: 780 tatgctacagtactgcttataggtcctttcagcacctgaatctgttcccgcttgcaacac 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8769 tatgctacagtactgcttataggtcctttcagcacctgaatctgttcccgcttgcaacac 8710
Query: 840 gaagggca-cgccaacaaccctttaatccat 869
|||||||| ||||||||||||||||||||||
Sbjct: 8709 gaagggcaccgccaacaaccctttaatccat 8679
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6399
Number of Sequences: 1807
Number of extensions: 6399
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 869
length of database: 10,358,551
effective HSP length: 16
effective length of query: 853
effective length of database: 10,329,639
effective search space: 8811182067
effective search space used: 8811182067
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)